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Influence of heterochirality on the structure, dynamics, biological properties of cyclic(PFPF) tetrapeptides obtained by solvent-free ball mill mechanosynthesis.

Authors :
Bak-Sypien, Irena
Pawlak, Tomasz
Paluch, Piotr
Wroblewska, Aneta
Dolot, Rafał
Pawlowicz, Aleksandra
Szczesio, Małgorzata
Wielgus, Ewelina
Kaźmierski, Sławomir
Górecki, Marcin
Pawlowska, Roza
Chworos, Arkadiusz
Potrzebowski, Marek J.
Source :
Scientific Reports; 6/4/2024, Vol. 14 Issue 1, p1-18, 18p
Publication Year :
2024

Abstract

Cyclic tetrapeptides c(Pro-Phe-Pro-Phe) obtained by the mechanosynthetic method using a ball mill were isolated in a pure stereochemical form as a homochiral system (all L-amino acids, sample A) and as a heterochiral system with D configuration at one of the stereogenic centers of Phe (sample B). The structure and stereochemistry of both samples were determined by X-ray diffraction studies of single crystals. In DMSO and acetonitrile, sample A exists as an equimolar mixture of two conformers, while only one is monitored for sample B. The conformational space and energetic preferences for possible conformers were calculated using DFT methods. The distinctly different conformational flexibility of the two samples was experimentally proven by Variable Temperature (VT) and 2D EXSY NMR measurements. Both samples were docked to histone deacetylase HDAC8. Cytotoxic studies proved that none of the tested cyclic peptide is toxic. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
20452322
Volume :
14
Issue :
1
Database :
Complementary Index
Journal :
Scientific Reports
Publication Type :
Academic Journal
Accession number :
177674362
Full Text :
https://doi.org/10.1038/s41598-024-63552-4