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A high-quality chromosome-level genome assembly of Ficus hirta.

Authors :
Huang, Weicheng
Ding, Yamei
Fan, Songle
Liu, Wanzhen
Chen, Hongfeng
Segar, Simon
Compton, Stephen G.
Yu, Hui
Source :
Scientific Data; 5/22/2024, Vol. 11 Issue 1, p1-6, 6p
Publication Year :
2024

Abstract

Ficus species (Moraceae) play pivotal roles in tropical and subtropical ecosystems. Thriving across diverse habitats, from rainforests to deserts, they harbor a multitude of mutualistic and antagonistic interactions with insects, nematodes, and pathogens. Despite their ecological significance, knowledge about the genomic background of Ficus remains limited. In this study, we report a chromosome-level reference genome of F. hirta, with a total size of 297.27 Mb, containing 28,625 protein-coding genes and 44.67% repeat sequences. These findings illuminate the genetic basis of Ficus responses to environmental challenges, offering valuable genomic resources for understanding genome size, adaptive evolution, and co-evolution with natural enemies and mutualists within the genus. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
20524463
Volume :
11
Issue :
1
Database :
Complementary Index
Journal :
Scientific Data
Publication Type :
Academic Journal
Accession number :
177423464
Full Text :
https://doi.org/10.1038/s41597-024-03376-z