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Global analysis of urinary extracellular vesicle small RNAs in autosomal dominant polycystic kidney disease.

Authors :
Ali, Hamad
Malik, Md. Zubbair
Abu‐Farha, Mohamed
Abubaker, Jehad
Cherian, Preethi
Nizam, Rasheeba
Jacob, Sindhu
Bahbahani, Yousif
Naim, Medhat
Ahmad, Sajjad
Al‐Sayegh, Mohammad
Thanaraj, Thangavel Alphonse
Ong, Albert C. M.
Harris, Peter C.
Al‐Mulla, Fahd
Source :
Journal of Gene Medicine; Feb2024, Vol. 26 Issue 2, p1-14, 14p
Publication Year :
2024

Abstract

Background: Autosomal dominant polycystic kidney disease (ADPKD) is the most prevalent monogenic renal disease progressing to end‐stage renal disease. There is a pressing need for the identification of early ADPKD biomarkers to enable timely intervention and the development of effective therapeutic approaches. Here, we profiled human urinary extracellular vesicles small RNAs by small RNA sequencing in patients with ADPKD and compared their differential expression considering healthy control individuals to identify dysregulated small RNAs and analyze downstream interaction to gain insight about molecular pathophysiology. Methods: This is a cross‐sectional study where urine samples were collected from a total of 23 PKD1‐ADPKD patients and 28 healthy individuals. Urinary extracellular vesicles were purified, and small RNA was isolated and sequenced. Differentially expressed Small RNA were identified and functional enrichment analysis of the critical miRNAs was performed to identify driver genes and affected pathways. Results: miR‐320b, miR‐320c, miR‐146a‐5p, miR‐199b‐3p, miR‐671‐5p, miR‐1246, miR‐8485, miR‐3656, has_piR_020497, has_piR_020496 and has_piR_016271 were significantly upregulated in ADPKD patient urine extracellular vesicles and miRNA‐29c was significantly downregulated. Five 'driver' target genes (FBRS, EDC3, FMNL3, CTNNBIP1 and KMT2A) were identified. Conclusions: The findings of the present study make significant contributions to the understanding of ADPKD pathogenesis and to the identification of novel biomarkers and potential drug targets aimed at slowing disease progression in ADPKD. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
1099498X
Volume :
26
Issue :
2
Database :
Complementary Index
Journal :
Journal of Gene Medicine
Publication Type :
Academic Journal
Accession number :
175673404
Full Text :
https://doi.org/10.1002/jgm.3674