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Machine learning-based high-frequency neuronal spike reconstruction from low-frequency and low-sampling-rate recordings.

Authors :
Hong, Nari
Kim, Boil
Lee, Jaewon
Choe, Han Kyoung
Jin, Kyong Hwan
Kang, Hongki
Source :
Nature Communications; 1/20/2024, Vol. 15 Issue 1, p1-13, 13p
Publication Year :
2024

Abstract

Recording neuronal activity using multiple electrodes has been widely used to understand the functional mechanisms of the brain. Increasing the number of electrodes allows us to decode more variety of functionalities. However, handling massive amounts of multichannel electrophysiological data is still challenging due to the limited hardware resources and unavoidable thermal tissue damage. Here, we present machine learning (ML)-based reconstruction of high-frequency neuronal spikes from subsampled low-frequency band signals. Inspired by the equivalence between high-frequency restoration and super-resolution in image processing, we applied a transformer ML model to neuronal data recorded from both in vitro cultures and in vivo male mouse brains. Even with the x8 downsampled datasets, our trained model reasonably estimated high-frequency information of spiking activity, including spike timing, waveform, and network connectivity. With our ML-based data reduction applicable to existing multichannel recording hardware while achieving neuronal signals of broad bandwidths, we expect to enable more comprehensive analysis and control of brain functions. Multichannel neural recording enhances understanding of brain function, but handling large data is challenging. Here, the authors develop machine learning-based high frequency spike reconstruction from subsampled low-frequency neuronal signals. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
20411723
Volume :
15
Issue :
1
Database :
Complementary Index
Journal :
Nature Communications
Publication Type :
Academic Journal
Accession number :
174918613
Full Text :
https://doi.org/10.1038/s41467-024-44794-2