Are Upwelling Systems an Underestimated Source of Long Chain Omega‐3 in the Ocean? The Case of the Southern Benguela Upwelling System.

The Benguela upwelling system (BUS) is one of the world's most productive ecosystems, supporting globally relevant fisheries. The BUS marine community is modulated by the availability of nutrients and omega‐3 long chain polyunsaturated fatty acid (hereafter, LC omega‐3). Phytoplankton growth in the BUS can be supported by upwelled nitrate, a new nitrogen (N) source to the surface, or by recycled N such as ammonium. Preferential assimilation of one N source over another may yield differences in LC omega‐3 production between high and low food‐quality species. To evaluate how upwelling and the N source(s) consumed by phytoplankton influence LC omega‐3 production, we sampled a BUS anchor station daily for 10 days. Upwelling on days 5–7 supplied high concentrations of nutrients to the surface, while pre‐ and post‐upwelling, surface waters were stratified and nutrient concentrations were low. LC omega‐3 and phytoplankton concentrations were near‐zero during upwelling, and elevated pre‐ and post‐upwelling. Throughout our sampling, nanoplankton (2.7–10 µm) dominated primary production (30–95%), relying mainly on nitrate to support their growth. Surface LC omega‐3 concentrations reached peaks of 215 and 175 µg L−1 pre‐ and post‐upwelling, up to 10 times higher than previous measurements from the BUS (<5 µg L−1). Pre‐upwelling, non‐diatom trophic markers (18:1n − 9, 18:4n − 3, 18:5n − 3) were dominant, with a switch over just two days to diatom trophic markers post‐upwelling (16:1n − 7, 16:2n − 4, 16:2n − 7, 16:3n − 4, 16:4n − 1). This study reveals the key role of upwelling in promoting phytoplankton LC omega‐3 production, which is tightly coupled to the supply of new nitrate. Additionally, the high observed LC omega‐3 concentrations suggest that global LC omega‐3 production is underestimated. Plain Language Summary: Omega‐3 are lipids found in foods such as fish that are extremely important for human health. However, humans and most animals cannot produce omega‐3 in sufficient quantities to satisfy their health requirements and must thus acquire them through their diet. In the ocean, the main source of omega‐3 is phytoplankton, with different species producing different quantities and kinds of omega‐3. Phytoplankton growth also depends on the availability of nutrients, including nitrogen (N). Dominant assimilation of a new N source such as upwelled nitrate versus a recycled N source such as ammonium typically leads to the proliferation of different phytoplankton communities, which may also produce different amounts of omega‐3. This study evaluates how upwelling, and the N source(s) used by phytoplankton, influence omega‐3 production. During a 10‐day investigation conducted off the west coast of South Africa, we found that upwelling promoted phytoplankton omega‐3 production and that the community relied mainly on upwelled nitrate. Additionally, community composition changed rapidly during the study in response to upwelling, which was reflected in the amount and kind of omega‐3 produced. We observed quantities of omega‐3 that were 10 times higher than previous measurements from the region, suggesting that global omega‐3 production may be underestimated. Key Points: Upwelling promoted phytoplankton long chain omega‐3 production which was tightly coupled to the introduction of new nitrate during upwellingPre‐upwelling, non‐diatom trophic markers were dominant, with a rapid switch over just 2 days to diatom trophic markers post‐upwellingLong chain omega‐3 concentrations were 10 times higher than previous records suggesting that their global production has been underestimated [ABSTRACT FROM AUTHOR]