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Proposal and extensive test of a calibration protocol for crop phenology models.

Authors :
Wallach, Daniel
Palosuo, Taru
Thorburn, Peter
Mielenz, Henrike
Buis, Samuel
Hochman, Zvi
Gourdain, Emmanuelle
Andrianasolo, Fety
Dumont, Benjamin
Ferrise, Roberto
Gaiser, Thomas
Garcia, Cecile
Gayler, Sebastian
Harrison, Matthew
Hiremath, Santosh
Horan, Heidi
Hoogenboom, Gerrit
Jansson, Per-Erik
Jing, Qi
Justes, Eric
Source :
Agronomy for Sustainable Development (Springer Science & Business Media B.V.); Aug2023, Vol. 43 Issue 4, p1-14, 14p
Publication Year :
2023

Abstract

A major effect of environment on crops is through crop phenology, and therefore, the capacity to predict phenology for new environments is important. Mechanistic crop models are a major tool for such predictions, but calibration of crop phenology models is difficult and there is no consensus on the best approach. We propose an original, detailed approach for calibration of such models, which we refer to as a calibration protocol. The protocol covers all the steps in the calibration workflow, namely choice of default parameter values, choice of objective function, choice of parameters to estimate from the data, calculation of optimal parameter values, and diagnostics. The major innovation is in the choice of which parameters to estimate from the data, which combines expert knowledge and data-based model selection. First, almost additive parameters are identified and estimated. This should make bias (average difference between observed and simulated values) nearly zero. These are "obligatory" parameters, that will definitely be estimated. Then candidate parameters are identified, which are parameters likely to explain the remaining discrepancies between simulated and observed values. A candidate is only added to the list of parameters to estimate if it leads to a reduction in BIC (Bayesian Information Criterion), which is a model selection criterion. A second original aspect of the protocol is the specification of documentation for each stage of the protocol. The protocol was applied by 19 modeling teams to three data sets for wheat phenology. All teams first calibrated their model using their "usual" calibration approach, so it was possible to compare usual and protocol calibration. Evaluation of prediction error was based on data from sites and years not represented in the training data. Compared to usual calibration, calibration following the new protocol reduced the variability between modeling teams by 22% and reduced prediction error by 11%. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
17740746
Volume :
43
Issue :
4
Database :
Complementary Index
Journal :
Agronomy for Sustainable Development (Springer Science & Business Media B.V.)
Publication Type :
Academic Journal
Accession number :
169782530
Full Text :
https://doi.org/10.1007/s13593-023-00900-0