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Assessing the prospect of XAFS experiments of metalloproteins under in vivo conditions at Indus-2 synchrotron facility, India.

Authors :
Lahiri, Debdutta
Agrawal, Richa
Chandravanshi, Khileshwari
Rajput, Parasmani
Agrawal, Ankur
Dwivedi, Ashutosh
Makde, Ravindra D.
Jha, S. N.
Garg, Nandini
Source :
Journal of Synchrotron Radiation; Mar2023, Vol. 30 Issue 2, p449-456, 8p
Publication Year :
2023

Abstract

The feasibility of X-ray absorption fine-structure (XAFS) experiments of ultradilute metalloproteins under in vivo conditions (T = 300 K, pH = 7) at the BL-9 bending-magnet beamline (Indus-2) is reported, using as an example analogous synthetic Zn (0.1 mM) M1dr solution. The (Zn K-edge) XAFS of M1dr solution was measured with a four-element silicon drift detector. The first-shell fit was tested and found to be robust against statistical noise, generating reliable nearest-neighbor bond results. The results are found to be invariant between physiological and non-physiological conditions, which confirms the robust coordination chemistry of Zn with important biological implications. The scope of improving spectral quality for accommodation of higher-shell analysis is addressed. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
09090495
Volume :
30
Issue :
2
Database :
Complementary Index
Journal :
Journal of Synchrotron Radiation
Publication Type :
Academic Journal
Accession number :
163033169
Full Text :
https://doi.org/10.1107/S1600577522011791