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WormBase single-cell tools.
- Source :
- Bioinformatics Advances; 2022, Vol. 2 Issue 1, p1-2, 2p
- Publication Year :
- 2022
-
Abstract
- We present two web apps for interactively performing common tasks with single-cell RNA sequencing data: scdefg for differential expression and wormcells-viz for visualization of gene expression. We deployed these tools with public Caenorhabditis elegans datasets curated by WormBase at https://single-cell.wormbase.org. Source code for deploying these tools with other datasets is available at https://github.com/WormBase/scdefg and https://github.com/WormBase/wormcells-viz. Supplementary information Supplementary data are available at Bioinformatics Advances online. [ABSTRACT FROM AUTHOR]
Details
- Language :
- English
- Volume :
- 2
- Issue :
- 1
- Database :
- Complementary Index
- Journal :
- Bioinformatics Advances
- Publication Type :
- Academic Journal
- Accession number :
- 162786268
- Full Text :
- https://doi.org/10.1093/bioadv/vbac018