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A review of methods for predicting DNA N6-methyladenine sites.

Authors :
Han, Ke
Wang, Jianchun
Wang, Yu
Zhang, Lei
Yu, Mengyao
Xie, Fang
Zheng, Dequan
Xu, Yaoqun
Ding, Yijie
Wan, Jie
Source :
Briefings in Bioinformatics; Jan2023, Vol. 24 Issue 1, p1-14, 14p
Publication Year :
2023

Abstract

Deoxyribonucleic acid(DNA) N6-methyladenine plays a vital role in various biological processes, and the accurate identification of its site can provide a more comprehensive understanding of its biological effects. There are several methods for 6mA site prediction. With the continuous development of technology, traditional techniques with the high costs and low efficiencies are gradually being replaced by computer methods. Computer methods that are widely used can be divided into two categories: traditional machine learning and deep learning methods. We first list some existing experimental methods for predicting the 6mA site, then analyze the general process from sequence input to results in computer methods and review existing model architectures. Finally, the results were summarized and compared to facilitate subsequent researchers in choosing the most suitable method for their work. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
14675463
Volume :
24
Issue :
1
Database :
Complementary Index
Journal :
Briefings in Bioinformatics
Publication Type :
Academic Journal
Accession number :
161419775
Full Text :
https://doi.org/10.1093/bib/bbac514