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Diverse dextranase genes fromPaenibacillusspecies.
- Source :
- Archives of Microbiology; Feb2005, Vol. 183 Issue 2, p140-147, 8p
- Publication Year :
- 2005
-
Abstract
- Genes encoding dextranolytic enzymes were isolated fromPaenibacillusstrains Dex40-8 and Dex50-2. Single, similar but non-identicaldex1genes were isolated from each strain, and a more divergentdex2gene was isolated from strain Dex50-2. The protein deduced from the Dex40-8dex1gene sequence had 716 amino acids, with a predictedM<subscript>r</subscript> of 80.8 kDa. The proteins deduced from the Dex50-2dex1anddex2gene sequences had 905 and 596 amino acids, with predictedM<subscript>r</subscript> of 100.1 kDa and 68.3 kDa, respectively. The deduced amino acid sequences of all three dextranolytic proteins had similarity to family 66 glycosyl hydrolases and were predicted to possess cleavable N-terminal signal peptides. Homology searches suggest that the Dex40-8 and Dex50-2 Dex1 proteins have one and two copies, respectively, of a carbohydrate-binding module similar to CBM_4_9 (pfam02018.11). The Dex50-2 Dex2 deduced amino acid sequence had highest sequence similarity to thermotolerant dextranases from thermophilicPaenibacillusstrains, while the Dex40-8 and Dex50-2 Dex1 deduced protein sequences formed a distinct sequence clade among the family 66 proteins. Examination of sevenPaenibacillusstrains, using a polymerase chain reaction-based assay, indicated that multiple family 66 genes are common within this genus. The three recombinant proteins expressed inEscherichia colipossessed dextranolytic activity and were able to convert ethanol-insoluble blue dextran into an ethanol-soluble product, indicating they are endodextranases (EC 3.2.1.11). The reaction catalysed by each enzyme had a distinct temperature and pH dependence. [ABSTRACT FROM AUTHOR]
- Subjects :
- GENES
ENZYMES
PROTEINS
AMINO acids
HYDROLASES
HOMOLOGY (Biology)
Subjects
Details
- Language :
- English
- ISSN :
- 03028933
- Volume :
- 183
- Issue :
- 2
- Database :
- Complementary Index
- Journal :
- Archives of Microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 15909618
- Full Text :
- https://doi.org/10.1007/s00203-004-0756-3