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Visualizing novel connections and genetic similarities across diseases using a network-medicine based approach.

Authors :
Ferolito, Brian
do Valle, Italo Faria
Gerlovin, Hanna
Costa, Lauren
Casas, Juan P.
Gaziano, J. Michael
Gagnon, David R.
Begoli, Edmon
Barabási, Albert-László
Cho, Kelly
Source :
Scientific Reports; 9/1/2022, Vol. 12 Issue 1, p1-12, 12p
Publication Year :
2022

Abstract

Understanding the genetic relationships between human disorders could lead to better treatment and prevention strategies, especially for individuals with multiple comorbidities. A common resource for studying genetic-disease relationships is the GWAS Catalog, a large and well curated repository of SNP-trait associations from various studies and populations. Some of these populations are contained within mega-biobanks such as the Million Veteran Program (MVP), which has enabled the genetic classification of several diseases in a large well-characterized and heterogeneous population. Here we aim to provide a network of the genetic relationships among diseases and to demonstrate the utility of quantifying the extent to which a given resource such as MVP has contributed to the discovery of such relations. We use a network-based approach to evaluate shared variants among thousands of traits in the GWAS Catalog repository. Our results indicate many more novel disease relationships that did not exist in early studies and demonstrate that the network can reveal clusters of diseases mechanistically related. Finally, we show novel disease connections that emerge when MVP data is included, highlighting methodology that can be used to indicate the contributions of a given biobank. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
20452322
Volume :
12
Issue :
1
Database :
Complementary Index
Journal :
Scientific Reports
Publication Type :
Academic Journal
Accession number :
158854969
Full Text :
https://doi.org/10.1038/s41598-022-19244-y