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Multi-Objective Optimization of Microalgae Metabolism: An Evolutive Algorithm Based on FBA.

Authors :
Briones-Baez, Monica Fabiola
Aguilera-Vazquez, Luciano
Rangel-Valdez, Nelson
Martinez-Salazar, Ana Lidia
Zuñiga, Cristal
Source :
Metabolites (2218-1989); Jul2022, Vol. 12 Issue 7, pN.PAG-N.PAG, 16p
Publication Year :
2022

Abstract

Studies enabled by metabolic models of different species of microalgae have become significant since they allow us to understand changes in their metabolism and physiological stages. The most used method to study cell metabolism is FBA, which commonly focuses on optimizing a single objective function. However, recent studies have brought attention to the exploration of simultaneous optimization of multiple objectives. Such strategies have found application in optimizing biomass and several other bioproducts of interest; they usually use approaches such as multi-level models or enumerations schemes. This work proposes an alternative in silico multiobjective model based on an evolutionary algorithm that offers a broader approximation of the Pareto frontier, allowing a better angle for decision making in metabolic engineering. The proposed strategy is validated on a reduced metabolic network of the microalgae Chlamydomonas reinhardtii while optimizing for the production of protein, carbohydrates, and CO 2 uptake. The results from the conducted experimental design show a favorable difference in the number of solutions achieved compared to a classic tool solving FBA. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
22181989
Volume :
12
Issue :
7
Database :
Complementary Index
Journal :
Metabolites (2218-1989)
Publication Type :
Academic Journal
Accession number :
158299173
Full Text :
https://doi.org/10.3390/metabo12070603