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Lederbergia citri sp. nov., and Lederbergia citrisecundus sp. nov., isolated from citrus rhizosphere.

Authors :
Liu, Guo-Hong
Narsing Rao, Manik Prabhu
Chen, Qian-Qian
Che, Jian-Mei
Shi, Huai
Liu, Bo
Li, Wen-Jun
Source :
Current Microbiology; Feb2022, Vol. 79 Issue 2, p1-6, 6p
Publication Year :
2022

Abstract

Two Gram-positive, rod-shaped, motile, endospore-forming strains, FJAT-49780<superscript>T</superscript> and FJAT-49732<superscript>T</superscript> were isolated from a citrus rhizosphere soil sample. The optimal growth temperatures for strains FJAT-49780<superscript>T</superscript> and FJAT-49732<superscript>T</superscript> were 45 and 35–40 °C, respectively. The optimal growth pH for strains FJAT-49732<superscript>T</superscript> and FJAT-49780<superscript>T</superscript> were pH 8.0 and pH 6.0, respectively. The 16S rRNA gene sequence similarity between FJAT-49780<superscript>T</superscript> and FJAT-49732<superscript>T</superscript> was 98.6%. Strains FJAT-49780<superscript>T</superscript> and FJAT-49732<superscript>T</superscript> shared 97.9–98.4% 16S rRNA gene sequence similarities to the type strain of Lederbergia wuyishanensis. In phylogenetic trees (based on 16S rRNA gene sequence), strains FJAT-49732<superscript>T</superscript> and FJAT-49780<superscript>T</superscript> clade with Lederbergia members. Both strains contained meso-diaminopimelic acid in their cell-wall peptidoglycan and MK-7 was the only isoprenoid quinone detected. The major fatty acids of strains FJAT-49732<superscript>T</superscript> and FJAT-49780<superscript>T</superscript> were anteiso-C<subscript>15:0</subscript> and iso-C<subscript>15:0</subscript>. The polar lipids of strain FJAT-49780<superscript>T</superscript> were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, an unidentified aminophospholipid, unidentified phospholipid and unidentified lipids while strain FJAT-49732<superscript>T</superscript> contained diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, an unidentified glycolipid, unidentified aminolipid and unidentified phospholipid. The genomic DNA G+C content of strains FJAT-49780<superscript>T</superscript> and FJAT-49732<superscript>T</superscript> were 37.0 and 36.7%, respectively. The digital DNA–DNA hybridization and average nucleotide identity values between strains FJAT-49780<superscript>T</superscript> and FJAT-49732<superscript>T</superscript> and with other members of the genus Lederbergia were below the cut-off level for species delineation. Thus, based on the above results, strains FJAT-49780<superscript>T</superscript> and FJAT-49732<superscript>T</superscript> represent two novel species of the genus Lederbergia, for which the names Lederbergia citri sp. nov., and Lederbergia citrisecundus sp. nov., are proposed. The type strains are FJAT-49780<superscript>T</superscript> (= CCTCC AB 2019242<superscript>T</superscript> = LMG 31583<superscript>T</superscript>) and FJAT-49732<superscript>T</superscript> (= CCTCC AB 2019246<superscript>T</superscript> = LMG 31584<superscript>T</superscript>). [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
03438651
Volume :
79
Issue :
2
Database :
Complementary Index
Journal :
Current Microbiology
Publication Type :
Academic Journal
Accession number :
154481237
Full Text :
https://doi.org/10.1007/s00284-021-02741-0