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Tumor mutation burden testing: a survey of the International Quality Network for Pathology (IQN Path).

Authors :
Fenizia, Francesca
Wolstenholme, Nicola
Fairley, Jennifer A.
Rouleau, Etienne
Cheetham, Melanie H.
Horan, Martin P.
Torlakovic, Emina
Besse, Benjamin
Al Dieri, Raed
Tiniakos, Dina G.
Deans, Zandra C.
Patton, Simon J.
Normanno, Nicola
Source :
Virchows Archiv: European Journal of Pathology; Dec2021, Vol. 479 Issue 6, p1067-1072, 6p
Publication Year :
2021

Abstract

While tumour mutation burden (TMB) is emerging as a possible biomarker for immune-checkpoint inhibitors (ICI), methods for testing have not been standardised as yet. In April 2019, the International Quality Network for Pathology (IQN Path) launched a survey to assess the current practice of TMB testing. Of the 127 laboratories that replied, 69 (54.3%) had already introduced TMB analysis for research purposes and/or clinical applications. Fifty laboratories (72.5%) used targeted sequencing, although a number of different panels were employed. Most laboratories tested formalin-fixed paraffin-embedded material (94.2%), while 18/69 (26%) tested also cell-free DNA. Fifty-five laboratories used both single nucleotide variants and indels for TMB calculation; 20 centers included only non-synonymous variants. In conclusion, the data from this survey indicate that multiple global laboratories were capable of rapidly introducing routine clinical TMB testing. However, the variability of testing methods raises concerns about the reproducibility of results among centers. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
09456317
Volume :
479
Issue :
6
Database :
Complementary Index
Journal :
Virchows Archiv: European Journal of Pathology
Publication Type :
Academic Journal
Accession number :
154457881
Full Text :
https://doi.org/10.1007/s00428-021-03093-7