Back to Search Start Over

Barapost: Binning of Nucleotide Sequences According to Taxonomic Annotation.

Authors :
Sikolenko, Maxim A.
Valentovich, Leonid N.
Source :
IEEE/ACM Transactions on Computational Biology & Bioinformatics; No/Dec2021, Vol. 18 Issue 6, p2766-2767, 2p
Publication Year :
2021

Abstract

Contemporary sequencing technologies, Oxford Nanopore in particular, provide a way to sequence multiple samples during single run using molecular barcodes. Specific circumstances, however, can make barcoding undesirable or unaffordable. Here, we introduce Barapost: a command-line toolkit that demultiplexes long nucleotide sequences relying on taxonomic annotation instead of barcoding. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
15455963
Volume :
18
Issue :
6
Database :
Complementary Index
Journal :
IEEE/ACM Transactions on Computational Biology & Bioinformatics
Publication Type :
Academic Journal
Accession number :
154073747
Full Text :
https://doi.org/10.1109/TCBB.2020.3009780