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Sandaracinobacteroides hominis gen. nov., sp. nov., isolated from human skin.

Authors :
Qu, Ping-Hua
Luo, Hai-Min
Feng, Jun-Hui
Li, Song
Chen, Cha
Dong, Lei
Ming, Yu-Zhen
Li, Wen-Jun
Lin, Ying
Source :
Archives of Microbiology; Oct2021, Vol. 203 Issue 8, p5067-5074, 8p
Publication Year :
2021

Abstract

Strain SZY PN-1<superscript> T</superscript>, representing a novel Gram-negative, aerobic, non-motile, rod-shaped and yellow-pigmented bacterium, was isolated from a skin sample of a healthy Chinese male. Growth occurred at pH 6.0–8.0 (optimum, pH 7.0) and 10–37 ℃ (optimum, 30 ℃) with 0–1.0% (w/v) NaCl in R2A agar. Comparative analysis of the 16S rRNA gene sequences revealed that strain SZY PN-1<superscript> T</superscript> shared high similarities with two invalid-published species, "Sandaracinobacter sibiricus" RB16-17 (97.1%) and "Sandaracinobacter neustonicus" JCM 30734 (96.6%), respectively. Phylogenetic analysis of 16S rRNA gene sequences together with protein-concatemer tree showed that SZY PN-1<superscript> T</superscript> formed a separate branch within the family Sphingosinicellaceae. The DNA G + C content of the strain SZY PN-1<superscript> T</superscript> was 65.0% (genome). The polar lipid profile included phosphatidylethanolamine, phosphatidylglycerol, two sphingoglycolipids, diphosphatidylglycerol, five unidentified glycolipids, and seven unidentified lipids. The predominant fatty acids (> 10.0%) were identified as C<subscript>18:1</subscript>ω7c and/or C<subscript>18:1</subscript>ω6c, C<subscript>17:1</subscript>ω6c, C<subscript>16:1</subscript>ω7c and/or C<subscript>16:1</subscript>ω6c. The major respiratory quinone was Q-10. Based on the phenotypic and genotypic features, a novel genus and species, Sandaracinobacteroides hominis gen. nov., sp. nov. is proposed, with type strain SZY PN-1<superscript> T</superscript> (= KCTC 82150<superscript> T</superscript> = NBRC 114675<superscript> T</superscript>). [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
03028933
Volume :
203
Issue :
8
Database :
Complementary Index
Journal :
Archives of Microbiology
Publication Type :
Academic Journal
Accession number :
152928277
Full Text :
https://doi.org/10.1007/s00203-021-02454-9