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Electrochemical sensing behavior of graphdiyne nanoflake towards uric acid: a quantum chemical approach.

Authors :
Asif, Misbah
Sajid, Hasnain
Ayub, Khurshid
Gilani, Mazhar Amjad
Akhter, Mohammed Salim
Mahmood, Tariq
Source :
Journal of Molecular Modeling; Sep2021, Vol. 27 Issue 9, p1-11, 11p
Publication Year :
2021

Abstract

Though the gas sensing applications of graphdiyne have widely reported; however, the biosensing utility of graphdiyne needs to be explored. This study deals with the sensitivity of graphdiyne nanoflake (GDY) towards the uric acid (UA) within the density functional framework. The uric acid is allowed to interact with graphdiyne nanoflake from all the possible orientations. Based on these interacting geometries, the complexes are differentiated with naming, i.e., UA1@GDY, UA2@GDY, UA3@GDY, and UA4@GDY (Fig. 1). The essence of interface interactions of UA on GDY is derived by computing geometric, energetic, electronic, and optical properties. The adsorbing affinity of complexes is evaluated at ωB97XD/6–31 + G(d, p) level of theory. The stabilities of the complexes are quantified through the interaction energies (E<subscript>int</subscript>) with reasonable accuracy. The calculated E<subscript>int</subscript> of the UA1@GDY, UA2@GDY, UA3@GDY, and UA4@GDY complexes are − 31.13, − 25.87, − 20.59, and − 16.54 kcal/mol, respectively. In comparison with geometries, it is revealed that the higher stability of complexes is facilitated by π-π stacking. Other energetic analyses including symmetry adopted perturbation theory (SAPT), noncovalent interaction index (NCI), and quantum theory of atoms in molecule (QTAIM) provide the evidence of dominating dispersion energy in stabilizing the resultant complexes. The HOMO–LUMO energies, NBO charge transfer, and UV–vis analysis justify the higher electronic transition in UA1@GDY, plays a role of higher sensitivity of GDY towards the π-stacked geometries over all other possible interaction orientations. The present findings bestow the higher sensitivity of GDY towards uric acid via π-stacking interactions. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
16102940
Volume :
27
Issue :
9
Database :
Complementary Index
Journal :
Journal of Molecular Modeling
Publication Type :
Academic Journal
Accession number :
152534939
Full Text :
https://doi.org/10.1007/s00894-021-04860-8