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Investigation new positions for catalytic activity of Chaetomium thermophilum and Ceriporiopsis subvermispora formate dehydrogenases.

Authors :
Koçdemir, Kübra
Şen, Fatma
Wedajo, Yasin Adem
Bilgici, Muazzez Çağla
Bayram, Mustafa
Selçuk, İlke
Yılmazer, Berin
Çakar, Mehmet Mervan
Aslan, Elif Sibel
Binay, Barış
Source :
Biocatalysis & Biotransformation; Aug2021, Vol. 39 Issue 4, p302-312, 11p
Publication Year :
2021

Abstract

NAD<superscript>+</superscript>-dependent formate dehydrogenases (FDHs, E.C 1.2.1.2) catalyse the reversible reaction of CO<subscript>2</subscript> to formate ion (HCOO<superscript>−</superscript>) and reduces NAD<superscript>+</superscript> molecule to NADH. Previously described FDHs from Chaetomium thermophilum (CtFDH) and Ceriporiopsis subvermispora (CsFDH) are active against formate and HCO<subscript>3</subscript><superscript>–</superscript>. In this study, we examined the functional effects of active site mutations in Ct and Cs NAD<superscript>+</superscript>-dependent FDHs. The residues Ile94, Asn120, Val310, His312 at CtFDH and Asn312, Val313, Val331 at CsFDH are located in the active site. The effects of amino acid changes on catalytic properties and thermal stability of CtFDH and CsFDH revealed some interesting results compared with structurally equivalent positions that have been studied in the literature. The strongest effect was observed in CsFDH Val313Pro against HCO<subscript>3</subscript><superscript>–</superscript>. The K<subscript>M</subscript> value of the CsFDH Val313 enzyme for HCO<subscript>3</subscript><superscript>–</superscript> substrate dramatically decreased, and enzyme activity increased. In CtFDH mutants, all enzymes except Val310Asn showed an increased k<subscript>cat</subscript> value when K<subscript>M</subscript> values increase. Analyses of results of mutant CtFDHs and CsFDHs give some promising results for CO<subscript>2</subscript> reduction as compared to the literature. Structural analyses of the substrate-binding site were done by homology modelling. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
10242422
Volume :
39
Issue :
4
Database :
Complementary Index
Journal :
Biocatalysis & Biotransformation
Publication Type :
Academic Journal
Accession number :
151775041
Full Text :
https://doi.org/10.1080/10242422.2020.1863951