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Comment on "Flexibility of short DNA helices with finite-length effect: From base pairs to tens of base pairs" [J. Chem. Phys. 142, 125103 (2015)].

Authors :
Segers, Midas
Skoruppa, Enrico
Stevens, Jan A.
Vangilbergen, Merijn
Voorspoels, Aderik
Carlon, Enrico
Source :
Journal of Chemical Physics; 7/14/2021, Vol. 155 Issue 2, p1-3, 3p
Publication Year :
2021

Abstract

As expected, the asymptotic persistence lengths are the same in these two cases, as both converge toward the same HT <math display="inline" overflow="scroll" xmlns="http://www.w3.org/1998/Math/MathML"><msubsup><mrow> l </mrow><mrow><mtext>B,T</mtext></mrow><mrow> </mrow></msubsup></math> ht for large m. However, the I B i SB I i sb are determined by the boundary contributions of short segments (small m). This relation holds approximately for the values reported by Wu I et al. i :[1] HT <math display="inline" overflow="scroll" xmlns="http://www.w3.org/1998/Math/MathML"><msubsup><mrow> l </mrow><mrow> B </mrow><mrow> </mrow></msubsup><mo>=</mo><mn>50</mn></math> ht nm, I A i = 450 nm, and I B i = 10. Note that expression (2) contains one parameter less than (1), implying that HT <math display="inline" overflow="scroll" xmlns="http://www.w3.org/1998/Math/MathML"> A <mo>=</mo><msubsup><mrow> l </mrow><mrow> B </mrow><mrow> </mrow></msubsup> B </math> ht . [Extracted from the article]

Details

Language :
English
ISSN :
00219606
Volume :
155
Issue :
2
Database :
Complementary Index
Journal :
Journal of Chemical Physics
Publication Type :
Academic Journal
Accession number :
151399246
Full Text :
https://doi.org/10.1063/5.0055349