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Prognostic Alternative mRNA Splicing in Adrenocortical Carcinoma.

Authors :
Liang, Weiwei
Sun, Fangfang
Source :
Frontiers in Endocrinology; 3/12/2021, Vol. 11, pN.PAG-N.PAG, 8p
Publication Year :
2021

Abstract

Background: This paper aims to identify alternative RNA splicing landscape and its prognostic value in adrenocortical carcinoma. Methods: The alternative splicing events data with corresponding clinical information data of 79 ACC patients were obtained from the Cancer Genome Atlas and SpliceSeq package. Prognosis-associated AS events by using univariate Cox regression analysis were selected. Gene functional enrichment analysis demonstrated the potential pathways enriched by survival-associated AS. Prognosis-related splicing events were submitted to develop moderate predictors using Lasso regression model. Results: One thousand five survival-associated alternative splicing events were identified. The prognostic genes included ATXN2L, MEIS1 , IKBKB , COX4I1. Functional enrichment analysis suggested that prognostic splicing events are associated with Wnt signaling pathway. A prediction model including 12 alternative splicing events was constructed by Lasso regression using train set. ROC analysis showed good performance of the prediction model in test set. Then, a nomogram integrating the clinical-pathological factors and riskscore was constructed for predicting 1‐ and 3‐year survival rate. Conclusion: Our data provide a comprehensive bioinformatics analysis of AS events in ACC, providing biomarkers for disease progression and a potentially rich source of novel therapeutic targets. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
16642392
Volume :
11
Database :
Complementary Index
Journal :
Frontiers in Endocrinology
Publication Type :
Academic Journal
Accession number :
149265009
Full Text :
https://doi.org/10.3389/fendo.2021.538364