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Homological scaffold via minimal homology bases.

Authors :
Guerra, Marco
De Gregorio, Alessandro
Fugacci, Ulderico
Petri, Giovanni
Vaccarino, Francesco
Source :
Scientific Reports; 3/8/2021, Vol. 11 Issue 1, p1-17, 17p
Publication Year :
2021

Abstract

The homological scaffold leverages persistent homology to construct a topologically sound summary of a weighted network. However, its crucial dependency on the choice of representative cycles hinders the ability to trace back global features onto individual network components, unless one provides a principled way to make such a choice. In this paper, we apply recent advances in the computation of minimal homology bases to introduce a quasi-canonical version of the scaffold, called minimal, and employ it to analyze data both real and in silico. At the same time, we verify that, statistically, the standard scaffold is a good proxy of the minimal one for sufficiently complex networks. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
20452322
Volume :
11
Issue :
1
Database :
Complementary Index
Journal :
Scientific Reports
Publication Type :
Academic Journal
Accession number :
149129618
Full Text :
https://doi.org/10.1038/s41598-021-84486-1