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Genetic Variation and Evolution of the 2019 Novel Coronavirus.
- Source :
- Public Health Genomics; 2021, Vol. 24 Issue 1-2, p54-66, 13p
- Publication Year :
- 2021
-
Abstract
- Introduction: SARS-CoV-2 is a new type of coronavirus causing a pandemic severe acute respiratory syndrome (SARS-2). Coronaviruses are very diverting genetically and mutate so often periodically. The natural selection of viral mutations may cause host infection selectivity and infectivity. Methods: This study was aimed to indicate the diversity between human and animal coronaviruses through finding the rate of mutation in each of the spike, nucleocapsid, envelope, and membrane proteins. Results: The mutation rate is abundant in all 4 structural proteins. The most number of statistically significant amino acid mutations were found in spike receptor-binding domain (RBD) which may be because it is responsible for a corresponding receptor binding in a broad range of hosts and host selectivity to infect. Among 17 previously known amino acids which are important for binding of spike to angiotensin-converting enzyme 2 (ACE2) receptor, all of them are conservative among human coronaviruses, but only 3 of them significantly are mutated in animal coronaviruses. A single amino acid aspartate-454, that causes dissociation of the RBD of the spike and ACE2, and F486 which gives the strength of binding with ACE2 remain intact in all coronaviruses. Discussion/Conclusion: Observations of this study provided evidence of the genetic diversity and rapid evolution of SARS-CoV-2 as well as other human and animal coronaviruses. [ABSTRACT FROM AUTHOR]
Details
- Language :
- English
- ISSN :
- 16624246
- Volume :
- 24
- Issue :
- 1-2
- Database :
- Complementary Index
- Journal :
- Public Health Genomics
- Publication Type :
- Academic Journal
- Accession number :
- 149042993
- Full Text :
- https://doi.org/10.1159/000513530