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Rapid screening of marine bacterial symbionts using MALDI-TOF MS.

Authors :
Vidal, Livia M. R.
Venas, Tainá M.
Gonçalves, Aline R. P.
Mattsson, Hannah K.
Silva, Raphael V. P.
Nóbrega, Maria S.
Azevedo, Gustavo P. R.
Garcia, Gizele D.
Tschoeke, Diogo A.
Vieira, Verônica V.
Thompson, Fabiano L.
Thompson, Cristiane C.
Source :
Archives of Microbiology; Oct2020, Vol. 202 Issue 8, p2329-2336, 8p
Publication Year :
2020

Abstract

Matrix-Assisted Laser Desorption Ionization Time-Of-Flight Mass Spectrometry (MALDI-TOF MS) is a rapid, cost-effective and high-throughput method for bacteria characterization. However, most previous studies focused on clinical isolates. In this study, we evaluated the use of MALDI-TOF MS as a rapid screening tool for marine bacterial symbionts. A set of 255 isolates from different marine sources (corals, sponge, fish and seawater) was analyzed using cell lysates to obtain a rapid grouping. Cluster analysis of mass spectra and 16S rRNA showed 18 groups, including Vibrio, Bacillus, Pseudovibrio, Alteromonas and Ruegeria. MALDI-TOF distance similarity scores ≥ 60% and ≥ 70% correspond to ≥ 98.7% 16S rRNA gene sequence similarity and ≥ 95% pyrH gene sequence similarity, respectively. MALDI-TOF MS is a useful tool for Vibrio species groups' identification. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
03028933
Volume :
202
Issue :
8
Database :
Complementary Index
Journal :
Archives of Microbiology
Publication Type :
Academic Journal
Accession number :
145372794
Full Text :
https://doi.org/10.1007/s00203-020-01917-9