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Effect of secondary interactions, steric hindrance and electric charge on the interaction of VIVO species with proteins.

Authors :
Sciortino, Giuseppe
Sanna, Daniele
Ugone, Valeria
Maréchal, Jean-Didier
Alemany-Chavarria, Mercεave;
Garribba, Eugenio
Source :
New Journal of Chemistry; 12/7/2019, Vol. 43 Issue 45, p17647-17660, 14p
Publication Year :
2019

Abstract

The interaction of two bis-chelated V<superscript>IV</superscript>O<superscript>2+</superscript> species, formed by pipemidic (Hpip) and 8-hydroxyquinoline-5-sulphonic acids (H<subscript>2</subscript>hqs), with two small proteins, ubiquitin (Ub) and lysozyme (Lyz), was studied by EPR, ESI-MS, docking and DFT methods. The two complexes differ in electric charge (at neutral pH it is +2 and −2 for the species of Hpip and H<subscript>2</subscript>hqs, respectively), coordination geometry (cis-[VO(Hpip)<subscript>2</subscript>(H<subscript>2</subscript>O)]<superscript>2+</superscript> is in equilibrium with the square pyramidal [VO(Hpip)<subscript>2</subscript>]<superscript>2+</superscript>, while cis-[VO(hqs)<subscript>2</subscript>(H<subscript>2</subscript>O)]<superscript>2−</superscript> is the only species in solution), and size (pipemidic acid is more sterically crowded than 8-hydroxyquinoline-5-sulphonic acid). The ESI-MS spectra showed that the number of cis-VO(hqs)<subscript>2</subscript><superscript>2−</superscript> moieties which interact with Ub is twice that of cis-VO(Hpip)<subscript>2</subscript><superscript>2+</superscript> (adducts with formula n[VOL<subscript>2</subscript>]–Ub, where n = 1–4 for H<subscript>2</subscript>hqs and n = 1–2 for Hpip, were detected). The data can be rationalized in terms of the lower steric requirements of hqs<superscript>2−</superscript> and its negative charge, which favour secondary interactions with the surface groups of the protein. The EPR spectra revealed the coordination of Asp/Glu-COO or His-N donors, while docking calculations allowed us to identify the Ub residues involved in the VO(Hpip)<subscript>2</subscript> (Asp39 and His68) and VO(hqs)<subscript>2</subscript> binding (Glu18, Asp39, Asp58 and His68). The steric hindrance of Hpip is so important that the interaction of cis-[VO(Hpip)<subscript>2</subscript>(H<subscript>2</subscript>O)]<superscript>2+</superscript> with lysozyme is completely prevented, while with cis-[VO(hqs)<subscript>2</subscript>(H<subscript>2</subscript>O)]<superscript>2−</superscript> the adducts n[VO(hqs)<subscript>2</subscript>]–Lyz (n = 1–2) were detected. Finally, the general effect of secondary interactions such as hydrogen bonds and van der Waals contacts, steric hindrance and electric charge on the V binding and stability of the adducts formed is also discussed, suggesting that these factors should be taken into account when designing new pharmacologically active compounds. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
11440546
Volume :
43
Issue :
45
Database :
Complementary Index
Journal :
New Journal of Chemistry
Publication Type :
Academic Journal
Accession number :
139730366
Full Text :
https://doi.org/10.1039/c9nj01956a