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Using slow frame rate imaging to extract fast receptive fields.

Authors :
Mano, Omer
Creamer, Matthew S.
Matulis, Catherine A.
Salazar-Gatzimas, Emilio
Chen, Juyue
Zavatone-Veth, Jacob A.
Clark, Damon A.
Source :
Nature Communications; 10/31/2019, Vol. 10 Issue 1, p1-13, 13p
Publication Year :
2019

Abstract

In functional imaging, large numbers of neurons are measured during sensory stimulation or behavior. This data can be used to map receptive fields that describe neural associations with stimuli or with behavior. The temporal resolution of these receptive fields has traditionally been limited by image acquisition rates. However, even when acquisitions scan slowly across a population of neurons, individual neurons may be measured at precisely known times. Here, we apply a method that leverages the timing of neural measurements to find receptive fields with temporal resolutions higher than the image acquisition rate. We use this temporal super-resolution method to resolve fast voltage and glutamate responses in visual neurons in Drosophila and to extract calcium receptive fields from cortical neurons in mammals. We provide code to easily apply this method to existing datasets. This method requires no specialized hardware and can be used with any optical indicator of neural activity. The temporal resolution of optical measurements of neural activity has traditionally been limited by the image or volume acquisition rate. Here, the authors describe an analysis that exploits the short duration of neural measurements within each image to extract neural responses at higher temporal resolution than the acquisition rate. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
20411723
Volume :
10
Issue :
1
Database :
Complementary Index
Journal :
Nature Communications
Publication Type :
Academic Journal
Accession number :
139438835
Full Text :
https://doi.org/10.1038/s41467-019-12974-0