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Description of Halegenticoccus soli gen. nov., sp. nov., a halophilic archaeon isolated from a soil sample of Ebi lake.

Authors :
Liu, Bing-Bing
Narsing Rao, Manik Prabhu
Yin, Xiao-Qing
Li, Xin
Salam, Nimaichand
Zhang, Yao
Alkhalifah, Dalal Hussien M.
Hozzein, Wael N.
Li, Wen-Jun
Source :
Extremophiles; Sep2019, Vol. 23 Issue 5, p521-528, 8p
Publication Year :
2019

Abstract

Two extreme halophilic archaeal strains, SYSUA9-0<superscript>T</superscript> and SYSUA9-1, were isolated from Ebi lake of Xinjiang, China. The colonies were Gram-negative, coccoid, and non-motile. Strains were aerobic and grew at 25–50 °C (optimum at 37 °C), in the presence of 10–35% (w/v) NaCl (optimum at 20–22%), and pH 6.0–8.0 (optimum at 7.0). The 16S rRNA gene sequence result revealed that the two strains were closely related to Haloprofundus marisrubri SB9<superscript>T</superscript> (92.7% similarity). The DNA–DNA hybridization value (97% ± 1%) suggested that SYSUA9-0<superscript>T</superscript> and SYSUA9-1 were similar; however, their sequence similarities with other archaeal members suggested that they were novel candidates. The genomic G + C content of SYSUA9-0<superscript>T</superscript> was 66.9%. The average nucleotide identity value between SYSU A9-0<superscript>T</superscript> and Haloprofundus marisrubri SB9<superscript>T</superscript> was 69.1%, which was far below the cutoff value (95–96%) proposed to define the species boundary. The polar lipids were phosphatidylglycerol (PG), phosphatidylglycerolphosphate methylester (PGP-Me), sulfated mannosyl glucosyl diether, mannosyl glucosyldiether, and four unidentified glycolipids. Phenotypic, chemotaxonomic and comparative genome analysis suggested that SYSU A9-0<superscript>T</superscript> and SYSU A9-1 represent a novel species of a new genus within the family Haloferacaceae, for which the name Halegenticoccus soli gen. nov., sp. nov., is proposed. The type strain is SYAUA9-0<superscript>T</superscript> (= KCTC4241<superscript>T</superscript> = CGMCC 1.15765<superscript>T</superscript>). [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
14310651
Volume :
23
Issue :
5
Database :
Complementary Index
Journal :
Extremophiles
Publication Type :
Academic Journal
Accession number :
138055499
Full Text :
https://doi.org/10.1007/s00792-019-01104-9