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Novel anelloviruses identified in buccal swabs of Antarctic fur seals.

Authors :
Crane, Adele
Goebel, Michael E.
Kraberger, Simona
Stone, Anne C.
Varsani, Arvind
Source :
Virus Genes; Oct2018, Vol. 54 Issue 5, p719-723, 5p
Publication Year :
2018

Abstract

Viral diversity associated with Antarctic wildlife remains poorly studied. Nonetheless, over the past 5 years, there has been a concerted effort using viral metagenomics approaches to identify and characterize viruses associated with Antarctic pinniped and avian species. Here we used a viral metagenomics approach to identify circular DNA viruses in buccal swab samples from Antarctic fur seals (Arctocephalus gazella) breeding on Livingston Island, Antarctica during the 2016/2017 field season. We identified two new lineages of anelloviruses, torque teno Arctocephalus gazella virus (TTAgV)-1 (2083 nts) and -2 (2127-2143 nts), which are most closely related to and cluster with a previously identified anellovirus associated with California sea lions (Zalophus californianus) sharing ~ 60% genome-wide pairwise identity. The ORF1 of TTAgVs share 26-41% amino acid similarity to the ORF1 of other previously identified pinniped-associated anelloviruses. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
09208569
Volume :
54
Issue :
5
Database :
Complementary Index
Journal :
Virus Genes
Publication Type :
Academic Journal
Accession number :
131881528
Full Text :
https://doi.org/10.1007/s11262-018-1585-9