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A pharmaco‐epistasis strategy reveals a new cell size controlling pathway in yeast.

Authors :
Moretto, Fabien
Sagot, Isabelle
Daignan-Fornier, Bertrand
Pinson, Benoît
Source :
Molecular Systems Biology; 2013, Vol. 9 Issue 1, p1-12, 12p, 7 Graphs
Publication Year :
2013

Abstract

Cell size is a complex quantitative trait resulting from interactions between intricate genetic networks and environmental conditions. Here, taking advantage of previous studies that uncovered hundreds of genes affecting budding yeast cell size homeostasis, we performed a wide pharmaco‐epistasis analysis using drugs mimicking cell size mutations. Simple epistasis relationship emerging from this approach allowed us to characterize a new cell size homeostasis pathway comprising the sirtuin Sir2, downstream effectors including the large ribosomal subunit (60S) and the transcriptional regulators Swi4 and Swi6. We showed that this Sir2/60S signaling route acts independently of other previously described cell size controlling pathways and may integrate the metabolic status of the cell through NAD<superscript>+</superscript> intracellular concentration. Finally, although Sir2 and the 60S subunits regulate both cell size and replicative aging, we found that there is no clear causal relationship between these two complex traits. This study sheds light on a pathway of >50 genes and illustrates how pharmaco‐epistasis applied to yeast offers a potent experimental framework to explore complex genotype/phenotype relationships. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
17444292
Volume :
9
Issue :
1
Database :
Complementary Index
Journal :
Molecular Systems Biology
Publication Type :
Academic Journal
Accession number :
131635301
Full Text :
https://doi.org/10.1038/msb.2013.60