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Information Technology Infrastructure for Agriculture Genotyping Studies.

Authors :
Pardamean, Bens
Baurley, James W.
Perbangsa, Anzaludin S.
Utami, Dwinita
Rijzaani, Habib
Satyawan, Dani
Source :
Journal of Information Processing Systems; Jun2018, Vol. 14 Issue 3, p655-665, 11p
Publication Year :
2018

Abstract

In efforts to increase its agricultural productivity, the Indonesian Center for Agricultural Biotechnology and Genetic Resources Research and Development has conducted a variety of genomic studies using highthroughput DNA genotyping and sequencing. The large quantity of data (big data) produced by these biotechnologies require high performance data management system to store, backup, and secure data. Additionally, these genetic studies are computationally demanding, requiring high performance processors and memory for data processing and analysis. Reliable network connectivity with large bandwidth to transfer data is essential as well as database applications and statistical tools that include cleaning, quality control, querying based on specific criteria, and exporting to various formats that are important for generating high yield varieties of crops and improving future agricultural strategies. This manuscript presents a reliable, secure, and scalable information technology infrastructure tailored to Indonesian agriculture genotyping studies. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
1976913X
Volume :
14
Issue :
3
Database :
Complementary Index
Journal :
Journal of Information Processing Systems
Publication Type :
Academic Journal
Accession number :
130607272
Full Text :
https://doi.org/10.3745/JIPS.01.0029