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Predicting molecular properties with covariant compositional networks.

Authors :
Hy, Truong Son
Trivedi, Shubhendu
Pan, Horace
Anderson, Brandon M.
Kondor, Risi
Source :
Journal of Chemical Physics; 6/25/2018, Vol. 148 Issue 24, pN.PAG-N.PAG, 11p, 3 Color Photographs, 3 Diagrams, 4 Charts
Publication Year :
2018

Abstract

Density functional theory (DFT) is the most successful and widely used approach for computing the electronic structure of matter. However, for tasks involving large sets of candidate molecules, running DFT separately for every possible compound of interest is forbiddingly expensive. In this paper, we propose a neural network based machine learning algorithm which, assuming a sufficiently large training sample of actual DFT results, can instead <italic>learn</italic> to predict certain properties of molecules purely from their molecular graphs. Our algorithm is based on the recently proposed covariant compositional networks framework and involves tensor reduction operations that are covariant with respect to permutations of the atoms. This new approach avoids some of the representational limitations of other neural networks that are popular in learning from molecular graphs and yields promising results in numerical experiments on the Harvard Clean Energy Project and QM9 molecular datasets. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
00219606
Volume :
148
Issue :
24
Database :
Complementary Index
Journal :
Journal of Chemical Physics
Publication Type :
Academic Journal
Accession number :
130571368
Full Text :
https://doi.org/10.1063/1.5024797