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Sequanix: a dynamic graphical interface for Snakemake workflows.
- Source :
- Bioinformatics; 6/1/2018, Vol. 34 Issue 11, p1934-1936, 3p
- Publication Year :
- 2018
-
Abstract
- Summary: We designed a PyQt graphical user interface--Sequanix--aimed at democratizing the use of Snakemake pipelines in the NGS space and beyond. By default, Sequanix includes Sequana NGS pipelines (Snakemake format) (http://sequana.readthedocs.io), and is also capable of loading any external Snakemake pipeline. New users can easily, visually, edit configuration files of expert-validated pipelines and can interactively execute these production-ready workflows. Sequanix will be useful to both Snakemake developers in exposing their pipelines and to a wide audience of users. [ABSTRACT FROM AUTHOR]
Details
- Language :
- English
- ISSN :
- 13674803
- Volume :
- 34
- Issue :
- 11
- Database :
- Complementary Index
- Journal :
- Bioinformatics
- Publication Type :
- Academic Journal
- Accession number :
- 130230303
- Full Text :
- https://doi.org/10.1093/bioinformatics/bty034