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A concise, efficient and versatile synthesis of amino‐substituted benzo[<italic>b</italic>]pyrimido[5,4‐<italic>f</italic>]azepines: synthesis and spectroscopic characterization, together with the molecular and supramolecular structures of three products and one intermediate

Authors :
Acosta Quintero, Lina M.
Burgos, Isidro
Palma, Alirio
Cobo, Justo
Glidewell, Christopher
Source :
Acta Crystallographica Section C: Structural Chemistry; Mar2018, Vol. 74 Issue 3, p312-320, 8p
Publication Year :
2018

Abstract

A concise, efficient and versatile synthesis of amino‐substituted benzo[&lt;italic&gt;b&lt;/italic&gt;]pyrimido[5,4‐&lt;italic&gt;f&lt;/italic&gt;]azepines is described: starting from a 5‐allyl‐4,6‐dichloropyrimidine, the synthesis involves base‐catalysed aminolysis followed by intramolecular Friedel–Crafts cyclization. Four new amino‐substituted benzo[&lt;italic&gt;b&lt;/italic&gt;]pyrimido[5,4‐&lt;italic&gt;f&lt;/italic&gt;]azepines are reported, and all the products and reaction intermediates have been fully characterized by IR, &lt;superscript&gt;1&lt;/superscript&gt;H and &lt;superscript&gt;13&lt;/superscript&gt;C NMR spectroscopy and mass spectrometry, and the molecular and supramolecular structures of three products and one intermediate have been determined. In each of &lt;italic&gt;N&lt;/italic&gt;,2,6,11‐tetramethyl‐&lt;italic&gt;N&lt;/italic&gt;‐phenyl‐6,11‐dihydro‐5&lt;italic&gt;H&lt;/italic&gt;‐benzo[&lt;italic&gt;b&lt;/italic&gt;]pyrimido[5,4‐&lt;italic&gt;f&lt;/italic&gt;]azepin‐4‐amine, C&lt;subscript&gt;22&lt;/subscript&gt;H&lt;subscript&gt;24&lt;/subscript&gt;N&lt;subscript&gt;5&lt;/subscript&gt;, (III), 4‐(1&lt;italic&gt;H&lt;/italic&gt;‐benzo[&lt;italic&gt;d&lt;/italic&gt;]imidazol‐1‐yl)‐6,11‐dimethyl‐6,11‐dihydro‐5&lt;italic&gt;H&lt;/italic&gt;‐benzo[&lt;italic&gt;b&lt;/italic&gt;]pyrimido[5,4‐&lt;italic&gt;f&lt;/italic&gt;]azepine, which crystallizes as a 0.374‐hydrate, C&lt;subscript&gt;21&lt;/subscript&gt;H&lt;subscript&gt;19&lt;/subscript&gt;N&lt;subscript&gt;5&lt;/subscript&gt;&#183;0.374H&lt;subscript&gt;2&lt;/subscript&gt;O, (VIII&lt;italic&gt;a&lt;/italic&gt;), and 6,7,9,11‐tetramethyl‐4‐(5‐methyl‐1&lt;italic&gt;H&lt;/italic&gt;‐benzo[&lt;italic&gt;d&lt;/italic&gt;]imidazol‐1‐yl)‐6,11‐dihydro‐5&lt;italic&gt;H&lt;/italic&gt;‐benzo[&lt;italic&gt;b&lt;/italic&gt;]pyrimido[5,4‐&lt;italic&gt;f&lt;/italic&gt;]azepine, C&lt;subscript&gt;24&lt;/subscript&gt;H&lt;subscript&gt;25&lt;/subscript&gt;N&lt;subscript&gt;5&lt;/subscript&gt;, (VIII&lt;italic&gt;c&lt;/italic&gt;), the azepine ring adopts a boat conformation, but with a different configuration at the stereogenic centre in (VIII&lt;italic&gt;c&lt;/italic&gt;), as compared with (III) and (VIII&lt;italic&gt;a&lt;/italic&gt;). In the intermediate 5‐allyl‐6‐(1&lt;italic&gt;H&lt;/italic&gt;‐benzo[&lt;italic&gt;d&lt;/italic&gt;]imidazol‐1‐yl)‐&lt;italic&gt;N&lt;/italic&gt;‐methyl‐&lt;italic&gt;N&lt;/italic&gt;‐(4‐methylphenyl)pyrimidin‐4‐amine, C&lt;subscript&gt;22&lt;/subscript&gt;N&lt;subscript&gt;21&lt;/subscript&gt;N&lt;subscript&gt;5&lt;/subscript&gt;, (VII&lt;italic&gt;b&lt;/italic&gt;), the immediate precursor of 4‐(1&lt;italic&gt;H&lt;/italic&gt;‐benzo[&lt;italic&gt;d&lt;/italic&gt;]imidazol‐1‐yl)‐6,8,11‐trimethyl‐6,11‐dihydro‐5&lt;italic&gt;H&lt;/italic&gt;‐benzo[&lt;italic&gt;b&lt;/italic&gt;]pyrimido[5,4‐&lt;italic&gt;f&lt;/italic&gt;]azepine, (VIII&lt;italic&gt;b&lt;/italic&gt;), the allyl group is disordered over two sets of atomic sites having occupancies of 0.688 (5) and 0.312 (5). The molecules of (III) are linked into chains by a C—H…π(pyrimidine) hydrogen bond, and those of (VII&lt;italic&gt;b&lt;/italic&gt;) are linked into complex sheets by three hydrogen bonds, one of the C—H…N type and two of C—H…π(arene) type. The molecules of the organic component in (VIII&lt;italic&gt;a&lt;/italic&gt;) are linked into a chain of rings by two C—H…π(arene) hydrogen bonds, and these chains are linked into sheets by the water components; a single weak C—H…N hydrogen bond links molecules of (VIII&lt;italic&gt;c&lt;/italic&gt;) into centrosymmetric &lt;italic&gt;R&lt;/italic&gt;&lt;subscript&gt;2&lt;/subscript&gt;&lt;superscript&gt;2&lt;/superscript&gt;(10) dimers. Comparisons are made with some related compounds. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
20532296
Volume :
74
Issue :
3
Database :
Complementary Index
Journal :
Acta Crystallographica Section C: Structural Chemistry
Publication Type :
Academic Journal
Accession number :
128313206
Full Text :
https://doi.org/10.1107/S2053229618002176