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Internal force corrections with machine learning for quantum mechanics/molecular mechanics simulations.

Authors :
Jingheng Wu
Lin Shen
Weitao Yang
Source :
Journal of Chemical Physics; 10/28/2017, Vol. 147 Issue 16, p1-6, 6p, 2 Graphs
Publication Year :
2017

Abstract

Ab initio quantum mechanics/molecular mechanics (QM/MM) molecular dynamics simulation is a useful tool to calculate thermodynamic properties such as potential of mean force for chemical reactions but intensely time consuming. In this paper, we developed a new method using the internal force correction for low-level semiempirical QM/MM molecular dynamics samplings with a predefined reaction coordinate. As a correction term, the internal force was predicted with a machine learning scheme, which provides a sophisticated force field, and added to the atomic forces on the reaction coordinate related atoms at each integration step. We applied this method to two reactions in aqueous solution and reproduced potentials of mean force at the ab initio QM/MM level. The saving in computational cost is about 2 orders of magnitude. The present work reveals great potentials for machine learning in QM/MM simulations to study complex chemical processes. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
00219606
Volume :
147
Issue :
16
Database :
Complementary Index
Journal :
Journal of Chemical Physics
Publication Type :
Academic Journal
Accession number :
127319605
Full Text :
https://doi.org/10.1063/1.5006882