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Illumina next-generation sequencing reveals the complete mitochondrial genome of Psenopsis anomala (Perciformes: Centrolophidae) with phylogenetic consideration.

Authors :
Chen, Huapu
Che, Zhiwei
Li, Jiantao
Dai, Mingli
Xiang, Ling
Deng, Siping
Zhu, Chunhua
Huang, Hai
Li, Guangli
Source :
Mitochondrial DNA. Part A; Sep2016, Vol. 27 Issue 5, p3428-3429, 2p, 1 Diagram
Publication Year :
2016

Abstract

Using Illumina next-generation sequencing (NGS), the complete mitochondrial genome of thePsenopsis anomalawas sequenced in the present study. The mitochondrial genome ofP. anomalais 16,528 bp long and consists of 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and a control region. The structure about gene order and composition ofP. anomalamitochondrial genome is similar to those of most other vertebrates. The nucleotide compositions of the light strand in descending order is 29.18% of T, 27.97% of G, 27.06% of A, and 15.79% of C. With the exception of the NADH dehydrogenase subunit 6 (ND6) and eight tRNA genes, other mitochondrial genes are encoded on the heavy strand. The phylogenetic analysis by maximum-likelihood (ML) method shown that thePsenopsis anomalawas closer toPeprilus triacanthusin the phylogenetic relationship. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
24701394
Volume :
27
Issue :
5
Database :
Complementary Index
Journal :
Mitochondrial DNA. Part A
Publication Type :
Academic Journal
Accession number :
115055927
Full Text :
https://doi.org/10.3109/19401736.2015.1022733