Back to Search Start Over

Feature Selection and Cancer Classification via Sparse Logistic Regression with the Hybrid L1/2 +2 Regularization.

Authors :
Huang, Hai-Hui
Liu, Xiao-Ying
Liang, Yong
Source :
PLoS ONE; 5/2/2016, Vol. 11 Issue 5, p1-15, 15p
Publication Year :
2016

Abstract

Cancer classification and feature (gene) selection plays an important role in knowledge discovery in genomic data. Although logistic regression is one of the most popular classification methods, it does not induce feature selection. In this paper, we presented a new hybrid L<subscript>1/2 +2</subscript> regularization (HLR) function, a linear combination of L<subscript>1/2</subscript> and L<subscript>2</subscript> penalties, to select the relevant gene in the logistic regression. The HLR approach inherits some fascinating characteristics from L<subscript>1/2</subscript> (sparsity) and L<subscript>2</subscript> (grouping effect where highly correlated variables are in or out a model together) penalties. We also proposed a novel univariate HLR thresholding approach to update the estimated coefficients and developed the coordinate descent algorithm for the HLR penalized logistic regression model. The empirical results and simulations indicate that the proposed method is highly competitive amongst several state-of-the-art methods. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
19326203
Volume :
11
Issue :
5
Database :
Complementary Index
Journal :
PLoS ONE
Publication Type :
Academic Journal
Accession number :
115054437
Full Text :
https://doi.org/10.1371/journal.pone.0149675