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Complete genome sequence of Dehalobacter restrictus PER-K23.

Authors :
Kruse, Thomas
Maillard, Julien
Goodwin, Lynne
Woyke, Tanja
Teshima, Hazuki
Bruce, David
Detter, Chris
Tapia, Roxanne
Han, Cliff
Huntemann, Marcel
Wei, Chia-Lin
Han, James
Chen, Amy
Kyrpides, Nikos
Szeto, Ernest
Markowitz, Victor
Ivanova, Natalia
Pagani, Ioanna
Pati, Amrita
Pitluck, Sam
Source :
Standards in Genomic Sciences; 2013, Vol. 8 Issue 3, p375-388, 14p
Publication Year :
2013

Abstract

Dehalobacter restrictus strain PER-K23 (DSM 9455) is the type strain of the species Dehalobacter restrictus. D. restrictus strain PER-K23 grows by organohalide respiration, coupling the oxidation of H to the reductive dechlorination of tetra- or trichloroethene. Growth has not been observed with any other electron donor or acceptor, nor has fermentative growth been shown. Here we introduce the first full genome of a pure culture within the genus Dehalobacter. The 2,943,336 bp long genome contains 2,826 protein coding and 82 RNA genes, including 5 16S rRNA genes. Interestingly, the genome contains 25 predicted reductive dehalogenase genes, the majority of which appear to be full length. The reductive dehalogenase genes are mainly located in two clusters, suggesting a much larger potential for organohalide respiration than previously anticipated. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
19443277
Volume :
8
Issue :
3
Database :
Complementary Index
Journal :
Standards in Genomic Sciences
Publication Type :
Academic Journal
Accession number :
110932737
Full Text :
https://doi.org/10.4056/sigs.3787426