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CHARACTERIZATION OF MICROSATELLITE LOCI FOR AN AUSTRALIAN EPIPHYTIC ORCHID, DENDROBIUM CALAMIFORME, USING ILLUMINA SEQUENCING.

Authors :
Trapnell, Dorset W.
Beasley, Rochelle R.
Lance, Stacey L.
Field, Ashley R.
Jones, Kenneth L.
Source :
Applications in Plant Sciences; Jun2015, Vol. 3 Issue 6, p1-N.PAG, 4p
Publication Year :
2015

Abstract

• Premise of the study: Microsatellite loci were developed for the epiphytic pencil orchid Dendrobium calamiforme for population genetic and phylogeographic investigation of this Australian taxon. • Methods and Results: Nineteen microsatellite loci were identified from an Illumina paired-end shotgun library of D. calamiforme. Polymorphism and genetic diversity were assessed in 24 individuals from five populations separated by a maximum distance of ∼80 km. All loci were polymorphic with two to 14 alleles per locus, expected heterozygosity ranging from 0.486 to 0.902, and probability of identity values ranging from 0.018 to 0.380. • Conclusions: These novel markers will serve as valuable tools for investigation of levels of genetic diversity as well as patterns of gene flow, genetic structure, and phylogeographic history. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
21680450
Volume :
3
Issue :
6
Database :
Complementary Index
Journal :
Applications in Plant Sciences
Publication Type :
Academic Journal
Accession number :
103126126
Full Text :
https://doi.org/10.3732/apps.1500016