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TcruziDB, an integrated database, and the WWW information server for the Trypanosoma cruzi genome project.

Authors :
Degrave W
de Miranda AB
Amorim A
Brandão A
Aslett M
Vandeyar M
Source :
Memorias do Instituto Oswaldo Cruz [Mem Inst Oswaldo Cruz] 1997 Nov-Dec; Vol. 92 (6), pp. 805-9.
Publication Year :
1997

Abstract

Data analysis, presentation and distribution is of utmost importance to a genome project. A public domain software, ACeDB, has been chosen as the common basis for parasite genome databases, and a first release of TcruziDB, the Trypanosoma cruzi genome database, is available by ftp from ftp://iris.dbbm.fiocruz.br/pub/genomedb/Tcr uziDB as well as versions of the software for different operating systems (ftp://iris.dbbm.fiocruz.br/pub/unixsoft/). Moreover, data originated from the project are available from the WWW server at http://www.dbbm.fiocruz.br. It contains biological and parasitological data on CL Brener, its karyotype, all available T. cruzi sequences from Genbank, data on the EST-sequencing project and on available libraries, a T. cruzi codon table and a listing of activities and participating groups in the genome project, as well as meeting reports. T. cruzi discussion lists (tcruzil@iris.dbbm.fiocruz.br and tcgenics@iris.dbbm.fiocruz.br) are being maintained for communication and to promote collaboration in the genome project.

Details

Language :
English
ISSN :
0074-0276
Volume :
92
Issue :
6
Database :
MEDLINE
Journal :
Memorias do Instituto Oswaldo Cruz
Publication Type :
Academic Journal
Accession number :
9580490
Full Text :
https://doi.org/10.1590/s0074-02761997000600015