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The evolution of dbSNP: 25 years of impact in genomic research.

Authors :
Phan L
Zhang H
Wang Q
Villamarin R
Hefferon T
Ramanathan A
Kattman B
Source :
Nucleic acids research [Nucleic Acids Res] 2024 Nov 12. Date of Electronic Publication: 2024 Nov 12.
Publication Year :
2024
Publisher :
Ahead of Print

Abstract

The Single Nucleotide Polymorphism Database (dbSNP), established in 1998 by the National Center for Biotechnology Information (NCBI), has been a critical resource in genomics for cataloging small genetic variations. Originally focused on single nucleotide polymorphisms (SNPs), dbSNP has since expanded to include a variety of genetic variants, playing a key role in genome-wide association studies (GWAS), population genetics, pharmacogenomics, and cancer research. Over 25 years, dbSNP has grown to include more than 4.4 billion submitted SNPs and 1.1 billion unique reference SNPs, providing essential data for identifying disease-related genetic variants and studying human diversity. Integrating large-scale projects like 1000 Genomes, gnomAD, TOPMed, and ALFA has expanded dbSNP's catalog of human genetic variation, increasing its usefulness for research and clinical applications. Keeping up with advancements such as next-generation sequencing and cloud-based infrastructure, dbSNP remains a cornerstone of genetic research supporting continued discoveries in precision medicine and population genomics. DATABASE URL: https://www.ncbi.nlm.nih.gov/snp.<br /> (Published by Oxford University Press on behalf of Nucleic Acids Research 2024.)

Details

Language :
English
ISSN :
1362-4962
Database :
MEDLINE
Journal :
Nucleic acids research
Publication Type :
Academic Journal
Accession number :
39530225
Full Text :
https://doi.org/10.1093/nar/gkae977