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Janibacter alittae sp. nov., an actinobacterium isolated from the gut of marine sandworm ( Alitta virens ).

Authors :
Kim B
Jun MO
Yang AI
Joe SH
Joe HI
Sung H
Kim KH
Kim HJ
Shin NR
Source :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2024 Oct; Vol. 74 (10).
Publication Year :
2024

Abstract

A novel Gram-stain-positive, facultatively anaerobic, non-motile, catalase-positive, oxidase-negative and ovoid cocci, designated as A1S7 <superscript>T</superscript> , was isolated from the gut of a marine sandworm ( Alitta virens ). Strain A1S7 <superscript>T</superscript> exhibited optimal growth at temperatures of 20-30 ℃, pH 6-8 and in the presence of 2-4% (w/v) NaCl. Phylogenetic analysis based on the 16S rRNA gene sequence indicated that strain A1S7 <superscript>T</superscript> belonged to the genus Janibacter , exhibiting a similarity of 99.0% to Janibacter cremeus KCTC 49873 <superscript>T</superscript> , followed by Janibacter anophelis KCTC 19282 <superscript>T</superscript> (98.8%), Janibacter hoylei KCTC 49872 <superscript>T</superscript> (98.4%), Janibacter limosus KACC 20518 <superscript>T</superscript> (98.2%) and Janibacter corallicola KACC 21120 <superscript>T</superscript> (97.2%). The complete genome sequence of strain A1S7 <superscript>T</superscript> revealed a genome size of 3360920 bp with a genomic G+C content of 70.1 mol%. The orthologous average nucleotide identity and the digital DNA-DNA hybridization values between strain A1S7 <superscript>T</superscript> and Janibacter cremeus KCTC 49873 <superscript>T</superscript> were determined to be 89.5 and 37.2%, respectively. The major respiratory quinone was MK-8(H <subscript>4</subscript> ). The predominant fatty acids (>10%) included iso -C <subscript>16:0</subscript> , C <subscript>17:1</subscript>  ω 8 c , C <subscript>18:1</subscript>  ω 9 c and C <subscript>17:0</subscript> . Polar lipids comprised diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, one unknown phosphoglycolipid and three unknown polar lipids. The cell-wall peptidoglycan type was A1 γ . The major whole-cell sugars were ribose, mannose and glucose. Based on phenotypic, phylogenetic, genotypic and chemotaxonomic properties, strain A1S7 <superscript>T</superscript> represents a novel species in the genus Janibacter , for which the name Janibacter alittae sp. nov. is proposed. The type strain is A1S7 <superscript>T</superscript> (=KCTC 49714 <superscript>T</superscript> = JCM 36706 <superscript>T</superscript> ).

Details

Language :
English
ISSN :
1466-5034
Volume :
74
Issue :
10
Database :
MEDLINE
Journal :
International journal of systematic and evolutionary microbiology
Publication Type :
Academic Journal
Accession number :
39453699
Full Text :
https://doi.org/10.1099/ijsem.0.006557