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Janibacter alittae sp. nov., an actinobacterium isolated from the gut of marine sandworm ( Alitta virens ).
- Source :
-
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2024 Oct; Vol. 74 (10). - Publication Year :
- 2024
-
Abstract
- A novel Gram-stain-positive, facultatively anaerobic, non-motile, catalase-positive, oxidase-negative and ovoid cocci, designated as A1S7 <superscript>T</superscript> , was isolated from the gut of a marine sandworm ( Alitta virens ). Strain A1S7 <superscript>T</superscript> exhibited optimal growth at temperatures of 20-30 ℃, pH 6-8 and in the presence of 2-4% (w/v) NaCl. Phylogenetic analysis based on the 16S rRNA gene sequence indicated that strain A1S7 <superscript>T</superscript> belonged to the genus Janibacter , exhibiting a similarity of 99.0% to Janibacter cremeus KCTC 49873 <superscript>T</superscript> , followed by Janibacter anophelis KCTC 19282 <superscript>T</superscript> (98.8%), Janibacter hoylei KCTC 49872 <superscript>T</superscript> (98.4%), Janibacter limosus KACC 20518 <superscript>T</superscript> (98.2%) and Janibacter corallicola KACC 21120 <superscript>T</superscript> (97.2%). The complete genome sequence of strain A1S7 <superscript>T</superscript> revealed a genome size of 3360920 bp with a genomic G+C content of 70.1 mol%. The orthologous average nucleotide identity and the digital DNA-DNA hybridization values between strain A1S7 <superscript>T</superscript> and Janibacter cremeus KCTC 49873 <superscript>T</superscript> were determined to be 89.5 and 37.2%, respectively. The major respiratory quinone was MK-8(H <subscript>4</subscript> ). The predominant fatty acids (>10%) included iso -C <subscript>16:0</subscript> , C <subscript>17:1</subscript> ω 8 c , C <subscript>18:1</subscript> ω 9 c and C <subscript>17:0</subscript> . Polar lipids comprised diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, one unknown phosphoglycolipid and three unknown polar lipids. The cell-wall peptidoglycan type was A1 γ . The major whole-cell sugars were ribose, mannose and glucose. Based on phenotypic, phylogenetic, genotypic and chemotaxonomic properties, strain A1S7 <superscript>T</superscript> represents a novel species in the genus Janibacter , for which the name Janibacter alittae sp. nov. is proposed. The type strain is A1S7 <superscript>T</superscript> (=KCTC 49714 <superscript>T</superscript> = JCM 36706 <superscript>T</superscript> ).
- Subjects :
- Animals
Phospholipids analysis
Peptidoglycan
Polychaeta microbiology
Genome, Bacterial
RNA, Ribosomal, 16S genetics
Phylogeny
Base Composition
Fatty Acids
DNA, Bacterial genetics
Bacterial Typing Techniques
Sequence Analysis, DNA
Vitamin K 2 analogs & derivatives
Vitamin K 2 analysis
Nucleic Acid Hybridization
Subjects
Details
- Language :
- English
- ISSN :
- 1466-5034
- Volume :
- 74
- Issue :
- 10
- Database :
- MEDLINE
- Journal :
- International journal of systematic and evolutionary microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 39453699
- Full Text :
- https://doi.org/10.1099/ijsem.0.006557