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Synthesis, XRD structural analysis and theoretical studies of a potential inhibitor against rheumatoid arthritis (RA).
- Source :
-
Acta crystallographica. Section C, Structural chemistry [Acta Crystallogr C Struct Chem] 2024 Nov 01; Vol. 80 (Pt 11), pp. 707-715. Date of Electronic Publication: 2024 Oct 24. - Publication Year :
- 2024
-
Abstract
- This work focused on analyzing the properties of N-(5-nitrothiazol-2-yl)furan-2-carboxamide (C <subscript>8</subscript> H <subscript>5</subscript> N <subscript>3</subscript> O <subscript>4</subscript> S, NTFC) as a possible inhibitor of the rheumatoid arthritis process. The synthesis of NTFC was carried out and good-quality crystals were obtained and studied by NMR ( <superscript>1</superscript> H and <superscript>13</superscript> C), DEPT 135, UV-Vis, IR, MS and single-crystal X-ray diffraction. The structure of NTFC consists of two rings, thiazole and furan, and a central C-N-C(=O)-C segment, which appears to be planar. This central amide segment forms angles of 2.61 (10) and 7.97 (11)° with the planes of the thiazole and furan rings, respectively. The crystal structure of NTFC exhibits N-H...N, N-H...O and C-H...O hydrogen bonds, and C-H...π and π-π interactions that facilitate self-assembly and the formation of hydrogen-bonded dimers, which implies the appearance of R <subscript>2</subscript> <superscript>2</superscript> (8) graph-set motifs in this interaction. The stability of the dimeric unit is complemented by the formation of strong intramolecular C-S...O interactions of chalcogen character, with an S...O distance of 2.6040 (18) Å. Hirshfeld surface (HS) analysis revealed that O...H/H...O interactions were dominant, accounting for 36.8% of the total HS, and that N-H...N interactions were fundamental to the formation of the dimeric structure. The molecular electrostatic potential (MEP) map showed a maximum energy of 46.73 kcal mol <superscript>-1</superscript> and a minimum of -36.06 kcal mol <superscript>-1</superscript> . The interaction energies of molecular pairs around NTFC are highest for those interactions linked by N-H hydrogen bonds. The properties of the NTFC ligand as a potential inhibitor of the DHODH (dihydroorotate dehydrogenase) enzyme were evaluated by molecular docking, showing coupling energies very close to those obtained with the control drug for rheumatoid arthritis, i.e. leflunomide.
- Subjects :
- Crystallography, X-Ray
Molecular Structure
Humans
Dihydroorotate Dehydrogenase
Antirheumatic Agents chemistry
Antirheumatic Agents chemical synthesis
Antirheumatic Agents pharmacology
Thiazoles chemistry
Thiazoles chemical synthesis
Molecular Docking Simulation
Furans chemistry
Furans chemical synthesis
Arthritis, Rheumatoid drug therapy
Hydrogen Bonding
Subjects
Details
- Language :
- English
- ISSN :
- 2053-2296
- Volume :
- 80
- Issue :
- Pt 11
- Database :
- MEDLINE
- Journal :
- Acta crystallographica. Section C, Structural chemistry
- Publication Type :
- Academic Journal
- Accession number :
- 39450509
- Full Text :
- https://doi.org/10.1107/S2053229624010106