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Robust machine learning challenge: An AIFM multicentric competition to spread knowledge, identify common pitfalls and recommend best practice.

Authors :
Maddalo M
Fanizzi A
Lambri N
Loi E
Branchini M
Lorenzon L
Giuliano A
Ubaldi L
Saponaro S
Signoriello M
Fadda F
Belmonte G
Giannelli M
Talamonti C
Iori M
Tangaro S
Massafra R
Mancosu P
Avanzo M
Source :
Physica medica : PM : an international journal devoted to the applications of physics to medicine and biology : official journal of the Italian Association of Biomedical Physics (AIFB) [Phys Med] 2024 Nov; Vol. 127, pp. 104834. Date of Electronic Publication: 2024 Oct 21.
Publication Year :
2024

Abstract

Purpose: A novel and unconventional approach to a machine learning challenge was designed to spread knowledge, identify robust methods and highlight potential pitfalls about machine learning within the Medical Physics community.<br />Methods: A public dataset comprising 41 radiomic features and 535 patients was employed to assess the potential of radiomics in distinguishing between primary lung tumors and metastases. Each participant developed two classification models using: (i) all features (base model); (ii) only robust features (robust model). Both models were validated with cross-validation and on unseen data. The population stability index (PSI) was used as diagnostic metric for implementation issues. Performance was compared to reference. Base and robust models were compared in terms of performance and stability (coefficient of variation (CoV) of prediction probabilities).<br />Results: PSI detected potential implementation errors in 70 % of models. The dataset exhibited strong imbalance. The average Gmean (i.e. an appropriate metric for imbalance) among all participants was 0.67 ± 0.01, significantly higher than reference Gmean of 0.50 ± 0.04. Robust models performances were slightly worse than base models (p < 0.05). Regarding stability, robust models exhibited lower median CoV on training set only.<br />Conclusion: AI4MP-Challenge models overperformed the reference, significantly improving the Gmean. Exclusion of less-robust features did not improve model robustness and it should be avoided when confounding effects are absent. Other methods, like harmonization or data augmentation, should be evaluated. This study demonstrated how the collaborative effort to foster knowledge on machine learning among medical physicists, through interactive sessions and exchange of information among participants, can result in improved models.<br />Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.<br /> (Copyright © 2024 Associazione Italiana di Fisica Medica e Sanitaria. Published by Elsevier Ltd. All rights reserved.)

Details

Language :
English
ISSN :
1724-191X
Volume :
127
Database :
MEDLINE
Journal :
Physica medica : PM : an international journal devoted to the applications of physics to medicine and biology : official journal of the Italian Association of Biomedical Physics (AIFB)
Publication Type :
Academic Journal
Accession number :
39437492
Full Text :
https://doi.org/10.1016/j.ejmp.2024.104834