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Evolution and Functional Dynamics of TCP Transcription Factor Gene Family in Passion Fruit ( Passiflora edulis ).

Authors :
Shad MA
Wu S
Rao MJ
Luo X
Huang X
Wu Y
Zhou Y
Wang L
Ma C
Hu L
Source :
Plants (Basel, Switzerland) [Plants (Basel)] 2024 Sep 13; Vol. 13 (18). Date of Electronic Publication: 2024 Sep 13.
Publication Year :
2024

Abstract

Passion fruit is a valued tropical fruit crop that faces environment-related growth strains. TCP genes are important for both growth modulation and stress prevention in plants. Herein, we systematically analyzed the TCP gene family in passion fruit, recognizing 30 members. Genes exhibiting closer phylogenetic relationships exhibited similar protein and gene structures. Gene members of the TCP family showed developmental-stage- or tissue-specific expression profiles during the passion fruit life cycle. Transcriptome data also demonstrated that many PeTCPs showed induced expression in response to hormonal treatments and cold, heat, and salt stress. Based on transcriptomics data, eight candidate genes were chosen for preferential gene expression confirmation under cold stress conditions. The qRT-PCR assays suggested PeTCP15/16 / 17 / 19 / 23 upregulation, while PeTCP1 / 11 / 25 downregulation after cold stress. Additionally, TCP19 / 20 / 29 / 30 exhibited in silico binding with cold-stress-related miRNA319s. GFP subcellular localization assays exhibited PeTCP19/1 were localized at the nucleus. This study will aid in the establishment of novel germplasm, as well as the further investigation of the roles of PeTCPs and their cold stress resistance characteristics.

Details

Language :
English
ISSN :
2223-7747
Volume :
13
Issue :
18
Database :
MEDLINE
Journal :
Plants (Basel, Switzerland)
Publication Type :
Academic Journal
Accession number :
39339543
Full Text :
https://doi.org/10.3390/plants13182568