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Reconciling heterogeneous dengue virus infection risk estimates from different study designs.

Authors :
Huang AT
Buddhari D
Kaewhiran S
Iamsirithaworn S
Khampaen D
Farmer A
Fernandez S
Thomas SJ
Barraquer IR
Hunsawong T
Srikiatkhachorn A
Dos Santos GR
O'Driscoll M
Hamins-Puertolas M
Endy T
Rothman AL
Cummings DAT
Anderson K
Salje H
Source :
MedRxiv : the preprint server for health sciences [medRxiv] 2024 Sep 10. Date of Electronic Publication: 2024 Sep 10.
Publication Year :
2024

Abstract

Uncovering rates at which susceptible individuals become infected with a pathogen, i.e. the force of infection (FOI), is essential for assessing transmission risk and reconstructing distribution of immunity in a population. For dengue, reconstructing exposure and susceptibility statuses from the measured FOI is of particular significance as prior exposure is a strong risk factor for severe disease. FOI can be measured via many study designs. Longitudinal serology are considered gold standard measurements, as they directly track the transition of seronegative individuals to seropositive due to incident infections (seroincidence). Cross-sectional serology can provide estimates of FOI by contrasting seroprevalence across ages. Age of reported cases can also be used to infer FOI. Agreement of these measurements, however, have not been assessed. Using 26 years of data from cohort studies and hospital-attended cases from Kamphaeng Phet province, Thailand, we found FOI estimates from the three sources to be highly inconsistent. Annual FOI estimates from seroincidence was 2.46 to 4.33-times higher than case-derived FOI. Correlation between seroprevalence-derived and case-derived FOI was moderate (correlation coefficient=0.46) and no systematic bias. Through extensive simulations and theoretical analysis, we show that incongruences between methods can result from failing to account for dengue antibody kinetics, assay noise, and heterogeneity in FOI across ages. Extending standard inference models to include these processes reconciled the FOI and susceptibility estimates. Our results highlight the importance of comparing inferences across multiple data types to uncover additional insights not attainable through a single data type/analysis.

Details

Language :
English
Database :
MEDLINE
Journal :
MedRxiv : the preprint server for health sciences
Publication Type :
Academic Journal
Accession number :
39314937
Full Text :
https://doi.org/10.1101/2024.09.09.24313375