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Genomic profiling of Antarctic geothermal microbiomes using long-read, Hi-C, and single-cell techniques.

Authors :
Myeong NR
Choe YH
Shin SC
Kim J
Sul WJ
Kim M
Source :
Scientific data [Sci Data] 2024 Sep 19; Vol. 11 (1), pp. 1023. Date of Electronic Publication: 2024 Sep 19.
Publication Year :
2024

Abstract

Geothermal features in Antarctica provide favorable conditions for diverse microorganisms, yet their genomic diversity remains poorly understood. Here, we present an integrated dataset comprising PacBio HiFi and Hi-C metagenomic sequencing, along with single-cell amplified genomes (SAGs) from two high-altitude geothermal sites, Mount Melbourne and Mount Rittmann, in Antarctica. The long-read HiFi sequencing, coupled with Hi-C, enhances the understanding of microbiome diversity and functionality in this unique ecosystem by providing more complete and accurate genomic information. SAGs complement this by recovering rare microbial taxa and offering a strain-resolved perspective. This dataset aims to deepen our understanding of microbial evolution and ecology in Antarctic geothermal environments, and facilitate cross-comparison with other geothermal environments globally.<br /> (© 2024. The Author(s).)

Details

Language :
English
ISSN :
2052-4463
Volume :
11
Issue :
1
Database :
MEDLINE
Journal :
Scientific data
Publication Type :
Academic Journal
Accession number :
39300163
Full Text :
https://doi.org/10.1038/s41597-024-03875-z