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Hepatic stellate cells promote hepatocellular carcinoma development by regulating histone lactylation: Novel insights from single-cell RNA sequencing and spatial transcriptomics analyses.
- Source :
-
Cancer letters [Cancer Lett] 2024 Nov 01; Vol. 604, pp. 217243. Date of Electronic Publication: 2024 Sep 10. - Publication Year :
- 2024
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Abstract
- This study evaluated the cellular heterogeneity and molecular mechanisms of hepatocellular carcinoma (HCC). Single cell RNA sequencing (scRNA-seq), transcriptomic data, histone lactylation-related genes were collected from public databases. Cell-cell interaction, trajectory, pathway, and spatial transcriptome analyses were executed. Differential expression and survival analyses were conducted. Western blot, Real-time reverse transcription PCR (qRT-PCR), and Cell Counting Kit 8 (CCK8) assay were used to detect the expression of αSMA, AKR1B10 and its target genes, and verify the roles of AKR1B10 in HCC cells. Hepatic stellate cell (HSC) subgroups strongly interacted with tumor cell subgroups, and their spatial distribution was heterogeneous. Two candidate prognostic genes (AKR1B10 and RMRP) were obtained. LONP1, NPIPB3, and ZSWIM6 were determined as AKR1B10 targets. Besides, the expression levels of AKR1B10 and αSMA were significantly increased in LX-2 + HepG2 and LX-2 + HuH7 groups compared to those in LX-2 group, respectively. sh-AKR1B10 significantly inhibited the HCC cell proliferation and change the expression of AKR1B10 target genes, Bcl-2, Bax, Pan Kla, and H3K18la at protein levels. Our findings unveil the pivotal role of HSCs in HCC pathogenesis through regulating histone lactylation.<br />Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.<br /> (Copyright © 2024 Elsevier B.V. All rights reserved.)
- Subjects :
- Humans
Cell Proliferation genetics
Hep G2 Cells
Gene Expression Profiling methods
Cell Line, Tumor
Aldo-Keto Reductases genetics
Aldo-Keto Reductases metabolism
Transcriptome
Sequence Analysis, RNA methods
Liver Neoplasms genetics
Liver Neoplasms pathology
Liver Neoplasms metabolism
Hepatic Stellate Cells metabolism
Hepatic Stellate Cells pathology
Carcinoma, Hepatocellular genetics
Carcinoma, Hepatocellular pathology
Carcinoma, Hepatocellular metabolism
Histones metabolism
Histones genetics
Gene Expression Regulation, Neoplastic
Single-Cell Analysis methods
Subjects
Details
- Language :
- English
- ISSN :
- 1872-7980
- Volume :
- 604
- Database :
- MEDLINE
- Journal :
- Cancer letters
- Publication Type :
- Academic Journal
- Accession number :
- 39260669
- Full Text :
- https://doi.org/10.1016/j.canlet.2024.217243