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Dolosigranulum savutiense sp. nov., isolated from human upper respiratory samples collected in Botswana.

Authors :
Popowitch EB
Boiditswe SC
Patel MZ
Aquino JN
Sozat AK
Caiazzo AJ
Maldonado-Barragán A
Hurst JH
Steenhoff AP
Kelly MS
Source :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2024 Aug; Vol. 74 (8).
Publication Year :
2024

Abstract

Four strains (MSK211, MSK294 <superscript>T</superscript> , MSK312, MSK433) of a novel Dolosigranulum species were cultured from nasopharyngeal swabs collected from mother-infant dyads in southern Botswana. These strains grew optimally on tryptic soy agar with 5% sheep blood solid medium and in fastidious bacteria broth. Colonies on tryptic soy agar with 5% sheep blood agar appeared grey or white with a flat, smooth surface and variable alpha haemolysis. Cells were Gram-positive, non-spore-forming, non-motile cocci that lacked catalase or oxidase activity. Major fatty acids were C <subscript>16 : 0</subscript> (palmitic acid), C <subscript>18 : 1 </subscript> ω9 c (oleic acid), and C <subscript>18 : 0</subscript> (stearic acid). Analyses of 16S rRNA gene sequences identified these strains as belonging to the genus Dolosigranulum (family Carnobacteriaceae ), which currently contains only a single validly published species ( Dolosigranulum pigrum ). Whole-genome sequencing revealed that the genomes of these strains are 1.98-2.07 Mbp in size and have a G+C content of 39.6-39.9 mol%. Comparisons of these genomes to publicly available genomes of D. pigrum yielded average nucleotide identities and in silico DNA-DNA hybridization values of 92.3-92.9% and 49.1-51.4%, respectively. These results indicate that these strains represent a novel species of Dolosigranulum , for which we propose the name Dolosigranulum savutiense sp. nov., with the type strain MSK294 <superscript>T</superscript> (=DSM 117171 <superscript>T</superscript> =JCM 36673 <superscript>T</superscript> ).

Details

Language :
English
ISSN :
1466-5034
Volume :
74
Issue :
8
Database :
MEDLINE
Journal :
International journal of systematic and evolutionary microbiology
Publication Type :
Academic Journal
Accession number :
39166976
Full Text :
https://doi.org/10.1099/ijsem.0.006498