Back to Search
Start Over
Chromosome-level genome assembly and annotation of Flueggea virosa (Phyllanthaceae).
- Source :
-
Scientific data [Sci Data] 2024 Aug 13; Vol. 11 (1), pp. 875. Date of Electronic Publication: 2024 Aug 13. - Publication Year :
- 2024
-
Abstract
- Flueggea virosa (Roxb. ex Willd.) Royle, an evergreen shrub and small tree in the Phyllanthaceae family, holds significant potential in garden landscaping and pharmacological applications. However, the lack of genomic data has hindered further scientific understanding of its horticultural and medicinal values. In this study, we have assembled a haplotype-resolved genome of F. virosa for the first time. The two haploid genomes, named haplotype A genome and haplotype B genome, are 487.33 Mb and 477.53 Mb in size, respectively, with contig N50 lengths of 31.45 Mb and 32.81 Mb. More than 99% of the assembled sequences were anchored to 13 pairs of pseudo-chromosomes. Furthermore, 21,587 and 21,533 protein-coding genes were predicted in haplotype A and haplotype B genomes, respectively. The availability of this chromosome-level genome fills the gap in genomic data for F. virosa and provides valuable resources for molecular studies of this species, supporting future research on speciation, functional genomics, and comparative genomics within the Phyllanthaceae family.<br /> (© 2024. The Author(s).)
- Subjects :
- Chromosomes, Plant
Haplotypes
Molecular Sequence Annotation
Genome, Plant
Subjects
Details
- Language :
- English
- ISSN :
- 2052-4463
- Volume :
- 11
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Scientific data
- Publication Type :
- Academic Journal
- Accession number :
- 39138223
- Full Text :
- https://doi.org/10.1038/s41597-024-03681-7