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Research on molecular characteristics of ADME-related genes in kidney renal clear cell carcinoma.
- Source :
-
Scientific reports [Sci Rep] 2024 Jul 22; Vol. 14 (1), pp. 16834. Date of Electronic Publication: 2024 Jul 22. - Publication Year :
- 2024
-
Abstract
- Genes involved in drug absorption, distribution, metabolism, and excretion (ADME) are named ADME genes. However, the comprehensive role of ADME genes in kidney renal clear cell carcinoma (KIRC) remains unclear. Using the clinical and gene expression data of KIRC patients downloaded from The Cancer Genome Atlas (TCGA), ArrayExpress, and the Gene Expression Omnibus (GEO) databases, we cluster patients into two patterns, and the population with a relatively poor prognosis demonstrated higher level of immunosuppressive cell infiltration and higher proportion of glycolytic subtypes. Then, 17 ADME genes combination identified through the least absolute shrinkage and selection operator algorithm (LASSO, 1000 times) was utilized to calculate the ADME score. The ADME score was found to be an independent predictor of prognosis in KIRC and to be tightly associated with the infiltration level of immune cells, metabolic properties, tumor-related signaling pathways, genetic variation, and responses to chemotherapeutics. Our work revealed the characteristics of ADME in KIRC. Assessing the ADME profiles of individual patients can deepen our comprehension of tumor microenvironment (TME) features in KIRC and can aid in developing more personalized and effective therapeutic strategies.<br /> (© 2024. The Author(s).)
- Subjects :
- Humans
Prognosis
Gene Expression Profiling
Antineoplastic Agents pharmacokinetics
Female
Male
Carcinoma, Renal Cell genetics
Carcinoma, Renal Cell metabolism
Carcinoma, Renal Cell pathology
Kidney Neoplasms genetics
Kidney Neoplasms metabolism
Kidney Neoplasms pathology
Tumor Microenvironment genetics
Gene Expression Regulation, Neoplastic
Subjects
Details
- Language :
- English
- ISSN :
- 2045-2322
- Volume :
- 14
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Scientific reports
- Publication Type :
- Academic Journal
- Accession number :
- 39039118
- Full Text :
- https://doi.org/10.1038/s41598-024-67516-6