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The complete mitogenome of the Atlantic longnose chimaera Rhinochimaera atlantica (Holt & Byrne, 1909).

Authors :
Matos A
Vilas-Arrondo N
Gomes-Dos-Santos A
Veríssimo A
Román-Marcote E
Baldó F
Moreno-Aguilar J
Pérez M
Lopes-Lima M
Froufe E
Castro LFC
Source :
Mitochondrial DNA. Part B, Resources [Mitochondrial DNA B Resour] 2024 Jul 17; Vol. 9 (7), pp. 886-891. Date of Electronic Publication: 2024 Jul 17 (Print Publication: 2024).
Publication Year :
2024

Abstract

Holocephali is a subclass of chondrichthyans with ample geographic distribution in marine ecosystems. Holocephalan species are organized into three families: Callorhinchidae, Chimaeridae, and Rhinochimaeridae. Despite the critical ecological and evolutionary importance, genomic information from holocephalans is still scarce, particularly from rhinochimaerids. The present study provides the first complete mitogenome of the Atlantic longnose chimaera Rhinochimaera atlantica (Holt & Byrne, 1909). The whole mitogenome was sequenced from an R. atlantica specimen, collected on the Porcupine Bank (NE Atlantic), by Illumina high-throughput sequencing. The R. atlantica mitogenome has 17,852 nucleotides with 13 protein-coding genes, 22 transfer RNA, and two ribosomal RNA genes. Nine of these genes are in the complementary strand. This mitogenome has a GC content of 41.5% and an AT content of 58.5%. The phylogenetic reconstruction provided here, using all the available complete and partial Holocephali mitogenomes, places R. atlantica in the Rhinochimaeridae family, as expected. This genomic resource will be useful in the genomic characterization of this species.<br />Competing Interests: The author Manuel Lopes-Lima is an Editorial Board Member for the journal – TMDN.<br /> (© 2024 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.)

Details

Language :
English
ISSN :
2380-2359
Volume :
9
Issue :
7
Database :
MEDLINE
Journal :
Mitochondrial DNA. Part B, Resources
Publication Type :
Academic Journal
Accession number :
39027115
Full Text :
https://doi.org/10.1080/23802359.2024.2378127